Part of one of my fanfics. Fluttershy is a PKMN Trainer and a traveling companion for the main character.
 
Her Team is the next:  
-Angel is a Minun for this history. There are real life animals too but Angel is a Pokémon.  
-Vivillon is here for obvious reasons.  
-Altaria resembles the birds, and Cloudsdale (Pony Fluttershy’s birthplace).  
-Goodra is a Dragon Type but it’s cute and kind, like its Trainer.  
-Ursaring is Harry, obviously.  
-Blaziken is her Starter. Unusual but I put it for a reason: The main character has 3 friends, including Fluttershy. They choiced the Hoenn starters, Torchic for Fluttershy.
 
(Reuploaded with a changes in her hair)